Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927619.1_cds_XP_016475365.1_67307
CDS Infomation

[gene=LOC107797039] [db_xref=GeneID:107797039] [protein=BTB/POZ domain-containing protein At3g08570-like isoform X3] [protein_id=XP_016475365.1] [location=complement(join(15919..16443,16685..17800))] [gbkey=CDS]
Sequence

ATGGTGGCGGATGCCAACGATCCAAATCTCCCAGAATTGGATTTGACTCACGTACCAGGA
GGACCTGAAACATTTGAACTGGCTGCAAAGTTTTGTTATGGCATGAACTTTGAGATCACA
ACCACAAACGTAGCACGTTTGCGCTGTGTGGCAGAATACTTGGAAATGACAGAAGATTAT
CGTGAAGAGAATCTCATTGCAAGAACAGAAACTTTCCTTGATGAAGTTGTCTCTCCAAGT
CTTGAAAAATCCGTGCAAGTACTTTCTTCCTGTGAAGCCCTGCTTCCTACTGCAGAGGAG
GTTGGTATTCCAGATAGATGCATTGATGCCATTGCCAGGAATGCTTGTCAGGAGCAACTT
GTATCCGGTCTATCTCGTTTAGATTGTGATACTGGATCTTTGGAACTTAAGGACAGGTGT
CTTGAATGGTGGGTCGAAGATCTATCTGCTCTGAGTATTGATTTTTATCGCAGAGTTATC
ATGGCAATGGGACATGTTGGGGTACACATCGACAGCATTATTGCGTCCTTGATGCATTAC
GCCCAGGTCTCTCTAAAGGGTATTGGGAAACCGCAAATTTGGAATCCAGCCAGATCGTAT
CCTTGTAAGGGAGAAAAGGGGCAGAGAACAATAATAGAAACTCTTGTTAGTCTATTGCCT
CCAGAAAAGAGTTCATCTGTTCCGCTGAATTTTCTTTTTGGGGTGTTGAGGATAGGTATC
ATGGTGGATGCCACGCTAGCCTGCAGGCTTGAAATTGAGAGGAGGATTGCCTTCAGGCTG
GAAATGGTCTTACTTGATGATTTGCTTATACCATCTGTCCAGACTACAGGTGATTCTTTG
TTTGATGTTGACACTGTCAAGCGGATATTGATACATTTCCTCCAAAGGATTGACCAGGAA
GAAAATGAAGATTGTGGATATGAATCACAAGGTATTGATTCTCCAAGCCATGGCGCTCTA
TTGAAAGTTGGACGGCTGATAGACACATATCTTGCTGAAATAGCTCCTGATCCATATTTG
AGTCTTGACAAATTCACTGCTATGATATCAGTGTTGCCTGAGTATGCTCGTGTAATTGAT
GACGGACTTTACAGAGCTATTGATGTTTATTTGAAGGCCCATCCAACGCTAAGTGAGCAT
GAAGCGAAGAAGCTGTGCAAGTTCATAGATTGCCAGAAGCTCTCTCAAGAAGCATGCAAT
CATGCAGCACGGAATGACAGACTCCCAGTTCAAATGACTGTCCGAGTTCTCTACTTTGAG
CAGCTCCGCCTTAAGAATGCTCTATCCGGAAGTTGTGGAGATACTTTTGTATCACAAAAG
ATCAGTAGTGGTCTTACAAGTGCAGCTATGTCGCCTAGAGATACTTATGCTTCTTTAAGG
AGAGAGAACCGAGAACTAAAGCTGGAGATATCAAGAATGAGGGTAAGGCTCAGTGACCTG
GAGAAGGAACAAGTGTTCATGAAACAAGGTATGATGGATAAAACAGGACATGGAAAAACA
TTCTTAACTTCCCTTTCAAGAGGTATAGGAAGAATTGGTATATTTAGCAGTCCTTCTGGA
GAAAAACATCACAAGTCGGGTCGCAAATCCAGGACATCAGAAGGTAAAACTGGTAGGAGT
AGGAAGTATTCTCTTTCCTAG

Peptide Sequence

PEP ID

XP_016475365.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein At3g08570-like isoform X3 [Nicotiana tabacum]
Sequence

MVADANDPNLPELDLTHVPGGPETFELAAKFCYGMNFEITTTNVARLRCVAEYLEMTEDY
REENLIARTETFLDEVVSPSLEKSVQVLSSCEALLPTAEEVGIPDRCIDAIARNACQEQL
VSGLSRLDCDTGSLELKDRCLEWWVEDLSALSIDFYRRVIMAMGHVGVHIDSIIASLMHY
AQVSLKGIGKPQIWNPARSYPCKGEKGQRTIIETLVSLLPPEKSSSVPLNFLFGVLRIGI
MVDATLACRLEIERRIAFRLEMVLLDDLLIPSVQTTGDSLFDVDTVKRILIHFLQRIDQE
ENEDCGYESQGIDSPSHGALLKVGRLIDTYLAEIAPDPYLSLDKFTAMISVLPEYARVID
DGLYRAIDVYLKAHPTLSEHEAKKLCKFIDCQKLSQEACNHAARNDRLPVQMTVRVLYFE
QLRLKNALSGSCGDTFVSQKISSGLTSAAMSPRDTYASLRRENRELKLEISRMRVRLSDL
EKEQVFMKQGMMDKTGHGKTFLTSLSRGIGRIGIFSSPSGEKHHKSGRKSRTSEGKTGRS
RKYSLS

Transcript Sequence

Gene sequence data has not been registered.